#######################################################################
## Proton dose calculator input file for: C:-work_localGit#######################################################################

# Text entries not preceeded by comments must not be changed!!

# GEOMETRY DATA

# CT density grid file
rhomw_grid_file
C:\010-work\003_localGit\WiscPlan_v2\WiscPlanPhotonkV125\PatientData\geometry_files\rhomw.bin

# Stopping power ratio grid file
Smw_grid_file
C:\010-work\003_localGit\WiscPlan_v2\WiscPlanPhotonkV125\PatientData\geometry_files\Smw.bin

# Tumor mask file
mask_file
C:\010-work\003_localGit\WiscPlan_v2\WiscPlanPhotonkV125\PatientData\geometry_files\target_mask.bin

# Grid containing 2D scaling F^2 factors
Fmw2_grid_file
C:\010-work\003_localGit\WiscPlan_v2\WiscPlanPhotonkV125\PatientData\geometry_files\Fmw2.bin

# Output dose file
batch_dose_file
C:\010-work\003_localGit\WiscPlan_v2\WiscPlanPhotonkV125\PatientData\batch_dose.bin

# Beam specification file
beam_spec_file
C:\010-work\003_localGit\WiscPlan_v2\WiscPlanPhotonkV125\PatientData\beam_spec_DAVE.txt

# Data grid dimensions (Xdim,Ydim,Zdim)
grid_dimensions
32 32 40

# Voxel dimensions (dx,dy,dz) [cm]
voxel_dimensions
1.568296 1.568296 0.500000

# Grid start coordinates (shifted) (x0,y0,z0) [cm]
start_coordinates
-23.964371 -24.964371 -18.646500

# Tumor Z coordinates (tumor_zstart, tumor_zend) [cm]
tumor_coordinates
0.000000 1.000000

# USER DEFINED BEAM DATA

# Calculation mode
treat_mode
SS

# DET margin
det_margin
0.100000

# Load beam specification file [1 for yes, 0 for no]
read_beam_spec_file
0

# Write beam specification file [1 for yes, 0 for no]
write_beam_spec_file
1

# Use 2D scaling method [1 for yes, 0 for no]
use_2D_scaling
1

# Gaussian spread parameters (sig_xp,sig_yp) [cm]
spread_parameters
0.600000 0.600000

# Gaussian spacing parameters (xSpace,ySpace,zSpace) [cm]
spacing_parameters
0.500000 0.500000 0.300000

# Rectangular aperture size in beams eye view (del_xp,del_yp) [cm]
aperture_size
4.000000 4.000000

# Number of beam angles
num_beam_angles
2

# Beam angles for calculation [degrees]
gantry_angles
-90.000000
90.000000

# Couch angles for calculation [degrees]
couch_angles
0.000000
0.000000

# Number of beamlets filling each beam angle aperture (Mxp,Nyp)
number_beamlets
512 512

# Source to axis distance (SAD) [cm]
SAD
100.000000

# PENCIL BEAM DATA

# Number of pencil beam energies
number_energies
576

# Pencil beam filenames file
pencil_beam_filenames
pencil_beam_files/pencil_beam_filenames.txt

# Location of pencil beam files
pencil_beam_path
pencil_beam_files
