 NIX Worker
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744d10b681
Making sure tmax is a float, since it is set as a string from labkey
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%!s(int64=2) %!d(string=hai) anos |
 Andrej
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88fdfb41a7
Changing output format to dictionary objects for getStartPoint and loadSolutionFromDir
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Andrej
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ed6e6dd877
Adjusting model parameters to include source term, setting values in l/hour units
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Andrej
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701e60dcbd
ipynb update
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Andrej
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5a1a7a4e6a
Adding source uncertainty
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Andrej
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dca0aad3d4
Converting sources to inputs, adjusting to account for compartment mass at injection, re-qualifying inputs as parameters, administrative move of parameter combinations (multiply, divide, add, power) to function.py
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Andrej
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0b100fff9c
Removing possibility of ignoring compartment volume
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Andrej
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842db6597c
Correcting exaggerated intestine volume
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%!s(int64=2) %!d(string=hai) anos |
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Andrej
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528d58b98f
Adding urine to scaled outputs
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Andrej
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47b95ecf9f
Adding scaling to input infrastructure
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Andrej
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7197c5d86f
Correcting wrong year conversion
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Andrej
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1de965453e
Minor corrections to runSolver
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Andrej
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8823ae3ca1
Changing verbosity of runSolver and adding strides to setupYear
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Andrej
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74273fb310
solving the read problem
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Andrej
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6a544c7e5b
Adding striding for intermediate solution storage
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Andrej
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5bab21d7e7
Scaling derivative matrix with weights; implementation of static jacobi for combined system
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Andrej
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c8cb3953b6
Adding humanHG_withHairPC to alleviate burden of computing large values with high accuracy, adding a dump compartment that doesn't get computed, removing hairPC references from non hairPC calculation
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Andrej
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22584ceb10
Changing output to nt
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%!s(int64=2) %!d(string=hai) anos |
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Andrej
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cf428f7988
Integrated iHG model
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%!s(int64=2) %!d(string=hai) anos |
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Andrej
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e1661f1b9f
Stop buffering intermediate output
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Andrej
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da36c0437a
Adding a progress report
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Andrej
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2e81ae9e2a
Moving __name__ part to the bottom of the runSolver to help with main being aware of functions that are defined later in the file
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%!s(int64=2) %!d(string=hai) anos |
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Andrej
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2eaedfcd39
Making output reloadable; figuring out variable ordering
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%!s(int64=2) %!d(string=hai) anos |
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Andrej
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332fe9e9cf
Solution reuse infrastructure (to continue on a time curve)
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Andrej
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c855b01d02
PC dist components
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%!s(int64=2) %!d(string=hai) anos |
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Andrej
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7646322c7c
Adding diffusion koefficients uncertainties
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%!s(int64=2) %!d(string=hai) anos |
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Andrej
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7f590c0a14
Minor errors
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%!s(int64=2) %!d(string=hai) anos |
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NIX Worker
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7d19cd15b7
Clearing conflicts in runSolver
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%!s(int64=2) %!d(string=hai) anos |
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NIX Worker
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401aa70bd7
Adding __main__ part to runSolver to allow access from analysisInterface
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%!s(int64=2) %!d(string=hai) anos |
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Andrej
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509e220bf5
Removing placenta from humanHG.json and creating (uncomplete) humanHG_pregnancy.json (to avoid zero mass divergent transfer compartments); allowing for interpolation of parameter specific derivatives to qt.txt, sOut.txt; adding write3D and read3D to runSolver to store 3D arrays; some cleanup of setup parsing in runSolver
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%!s(int64=2) %!d(string=hai) anos |
