{ "timeUnit":"min", "compartments":[ "redBloodCells","plasma","venous","kidney","urine", "richlyPerfused","fat","slowlyPerfused","hair", "brainBlood","brain", "liver","gut","intestine","feces", "bloodI","liverI","kidneyI","hairI","brainI","fecesI"], "commentScaled":"add compartments that only have inputs so they can be scaled to total input", "scaled":["hair","hairI","feces","fecesI","urine"], "commentParameters":"every parameter must have a value, name is optional and used in SE computation", "volumeComment":"in a compartment w/o volume, value is mass", "volumes":{ "plasma":"plasmaVolume", "venous":"venousVolume", "kidney":"kidneyVolume", "richlyPerfused":"richlyPerfusedVolume", "fat":"fatVolume", "slowlyPerfused":"slowlyPerfusedVolume", "brainBlood":"brainBloodVolume", "gut":"gutVolume", "intestine":"intestineVolume", "redBloodCells":"redBloodCellsVolume", "brain":"brainVolume", "liver":"liverVolume", "bloodI":"bloodVolume", "liverI":"liverVolume", "kidneyI":"kidneyVolume", "brainI":"brainVolume" }, "flows":{ "(plasma,venous):kidney":"kidneyFlow", "(plasma,venous):richlyPerfused":"richlyPerfusedFlow", "(plasma,venous):fat":"fatFlow", "(plasma,venous):slowlyPerfused":"slowlyPerfusedFlow", "(plasma,venous):brainBlood":"brainBloodFlow", "plasma:liver":"liverInFlow", "liver:venous":"liverOutFlow", "(plasma,liver):gut":"gutFlow", "plasma:venous":"plasmaFlow"}, "commentSources":"constants in concentration units per s", "commentHeavyside":"value is mass of exogene/volume of container/duration", "inputs":{ "intestine":"oralIngestion"}, "commentBindings":"split to flow and diffusion dominated", "bindings": { "flowComments":"group common sources or targets with brackets", "flow":[ "(kidney,richlyPerfused,fat,slowlyPerfused,brainBlood,liver)->venous", "gut->liver", "plasma->(kidney,richlyPerfused,fat,slowlyPerfused,brainBlood,liver,gut)", "venous->plasma"], "diffusion":{ "plasma->redBloodCells":"kRBC", "redBloodCells->plasma":"kRBC", "kidney->urine":"kU", "slowlyPerfused->hair":"kH", "brainBlood->brain":"kBR", "brain->venous":"kBR", "liver->intestine":"kB", "intestine->gut":"kR", "intestine->feces":"kF", "plasma->liverI":"dBLPlasma", "liverI->bloodI":"kLB:I", "liverI->fecesI":"kLF:I", "bloodI->kidneyI":"kBK:I", "kidneyI->bloodI":"kKB:I", "kidneyI->urine":"kKU:I", "bloodI->hairI":"kBH:I", "brainI->bloodI":"kBrB:I", "bloodI->urine":"kBU:I", "bloodI->brainI":"kBBr:I", "bloodI->fecesI":"kBF:I", "plasma->brainI":"dBBrPlasma"}}, "pcComments":"always related to outflow of organs", "partitionCoefficients":{ "kidney":"kidneyPCplasma", "richlyPerfused":"richlyPerfusedPCplasma", "fat":"fatPCplasma", "slowlyPerfused":"slowlyPerfusedPCplasma", "brainBlood":"brainBloodPCplasma", "liver":"liverPCplasma", "gut":"gutPCplasma", "brain->venous":"brainPCplasma", "redBloodCells->plasma":"rbcPCplasma"} }