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@@ -151,7 +151,7 @@ def writeSegmentation(db,r,setup):
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# print(v[i,:])
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numpy.savetxt(os.path.join(locDir,fileName),v)
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-def plotSegmentation(db,fb,r,setup):
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+def plotSegmentation(db,fb,r,setup,vmax=1000):
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copyFields=['PatientId','visitName']
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qFilter=[{'variable':x,'value':r[x],'oper':'eq'} for x in copyFields]
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nim=getData.getPatientNIM(fb,r,setup)
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@@ -181,7 +181,6 @@ def plotSegmentation(db,fb,r,setup):
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w1=20
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cut2=20
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w2=20
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- vmax=1000
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vmin=0
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nd=3
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fig,ax=matplotlib.pyplot.subplots(3,2*nd+1,figsize=(20,12))
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