 Andrej Studen
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f1c4e7b732
Adding un-buffer flag to python for uptodate output
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3 years ago |
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Andrej Studen
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083ed06079
Changing to nixWrapper
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3 years ago |
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Andrej Studen
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ab22d0e9bf
Splitting runPython.sh to runPythonnnUNet.sh to use with nnUNet code
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3 years ago |
 Andrej Studen
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9ae439d111
Adding segmentation configuration files
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3 years ago |
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Andrej Studen
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4d0276ab7b
Have runPython.sh run within venv, nnUnet set
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3 years ago |
 Andrej
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cdb79e7b12
Removing saved_models from irAEMM project (moving it to irAEMMSegmentationModels project)
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3 years ago |
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Andrej
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43c785d716
Adding test.py script
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3 years ago |
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Andrej
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90b4734ea6
Adding iypnb jupyter scripts for database manipulation
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3 years ago |
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Andrej
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14346cae34
minor changes to default parameter values in segmentation.json.sample
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3 years ago |
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Andrej
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7610919def
Moving saved_models to irAEMMSegmentationModels project
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3 years ago |
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Andrej
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1bdf95612e
Adding automated segmentation script
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3 years ago |
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Andrej
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8a8b58d515
Adding default view as segmentationReview
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3 years ago |
 Andrej Studen/Merlin
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cc26fefd7c
Making run segmentation for non-divided files
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3 years ago |
 NIX User
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e18a635685
Merge branch 'master' of wiscigt.powertheword.com:oil/iraemm
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3 years ago |
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NIX User
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05fa966798
Recent updates
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3 years ago |
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Andrej Studen/Merlin
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b52ae890d7
Merge branch 'master' of wiscigt.powertheword.com:oil/iraemm
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3 years ago |
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Andrej Studen/Merlin
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d449f0095c
Recent updates
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3 years ago |
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Andrej
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4daeb8a35d
Changing slicerModule directory to default
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4 years ago |
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Andrej
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f6b61e81c1
Updated version that is based of labkeyInterface
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4 years ago |
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Andrej
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09158d192d
Merge branch 'master' of wiscigt.powertheword.com:oil/iraemm
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4 years ago |
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Andrej
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82177d2c7a
Updating iraemmBrowser to allow multiuser segmentation and adverse effect detection review
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4 years ago |
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Andrej Studen/Merlin
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d23fdfb3fd
Updating preprocess.py
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4 years ago |
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Andrej Studen/Merlin
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3dec2cb5da
Update add segmentations
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4 years ago |
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Andrej Studen/Merlin
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f4eaa26542
Adding updates to segmentation
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4 years ago |
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NIX User
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b64adcfd2b
Updates to runSegmentation and associated configuration
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4 years ago |
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NIX User
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dec7d0b62c
Merge branch 'master' of wiscigt.powertheword.com:oil/iraemm
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4 years ago |
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NIX User
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6551f17992
Have preprocess.py look in setup file to figure local postions of matlab, etc.
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4 years ago |
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NIX User
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07478c6846
Making populateImagingFromOrthance.py use Analysis/Run infrastructure
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4 years ago |
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Andrej
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b0705b354d
Adding patientmask to outputs of preprocess.py
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4 years ago |
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Andrej
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fe0f9b0c6d
Merge branch 'master' of wiscigt.powertheword.com:oil/iraemm
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4 years ago |
