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NIX User 45062e572d Adding verbosity in populateImagingFromTransferList 3 anos atrás
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README 53fb46eaa9 Updating to recent version 4 anos atrás
addSegmentations.py 3dec2cb5da Update add segmentations 4 anos atrás
anonymizeImages.py ae65c9190e Updates 4 anos atrás
anonymizeImagesNIfTI.py 53fb46eaa9 Updating to recent version 4 anos atrás
anonymizeSegmentations.py 05fa966798 Recent updates 3 anos atrás
copyAnonymizedDataset.py 1f7661b703 Adding database management routines 4 anos atrás
copyAnonymizedImagesToOrthanc.py 1f7661b703 Adding database management routines 4 anos atrás
copyToOrthanc.py 1fd9314ca6 Initial import 4 anos atrás
fillClinicalDataInternational.ipynb 90b4734ea6 Adding iypnb jupyter scripts for database manipulation 3 anos atrás
findCandidatesForSchedule.py d027e88d51 Adding findCandidatesForSchedule.py 3 anos atrás
generateFigures.py e452adcbb8 Adding recent scripts, particularly generateFigures.py and updates to segmentationIRAEMM_ONKO.json 3 anos atrás
getImages.py 1fd9314ca6 Initial import 4 anos atrás
iraemmUploadTestPatients.ipynb 90b4734ea6 Adding iypnb jupyter scripts for database manipulation 3 anos atrás
makeAnonymizeLinks.py 1fd9314ca6 Initial import 4 anos atrás
makeAnonymizedDataset.py 1f7661b703 Adding database management routines 4 anos atrás
modifyDataset.py e452adcbb8 Adding recent scripts, particularly generateFigures.py and updates to segmentationIRAEMM_ONKO.json 3 anos atrás
modifyPatients.py 1f7661b703 Adding database management routines 4 anos atrás
organ_percentile.py c7f8174426 Adding organ_percentile calculation, runs with segmentation.json 3 anos atrás
populateImagingFromOrthanc.py 07478c6846 Making populateImagingFromOrthance.py use Analysis/Run infrastructure 4 anos atrás
populateImagingFromTransferList.py 45062e572d Adding verbosity in populateImagingFromTransferList 3 anos atrás
preprocess.py 0cb3f65861 Adding comments and redirecting gzip to setup.json indicated binary in preprocess.py 3 anos atrás
runPython.sh 1cb816f9f9 Merge to core 3 anos atrás
runPythonnnUNet.sh f1c4e7b732 Adding un-buffer flag to python for uptodate output 3 anos atrás
runSegmentationDM.py 9ae439d111 Adding segmentation configuration files 3 anos atrás
runSegmentationnnUNet.py d18ee3ff86 Correcting spelling error 3 anos atrás
test.py 43c785d716 Adding test.py script 3 anos atrás

README

Run with ./runPython.sh script.py