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irAEMM
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Andrej Studen fc25bd8249 Merge branch 'master' of wiscigt.powertheword.com:oil/iraemm 3 lat temu
..
README 53fb46eaa9 Updating to recent version 4 lat temu
addSegmentations.py 3dec2cb5da Update add segmentations 4 lat temu
anonymizeImages.py ae65c9190e Updates 4 lat temu
anonymizeImagesNIfTI.py 53fb46eaa9 Updating to recent version 4 lat temu
anonymizeSegmentations.py 05fa966798 Recent updates 3 lat temu
copyAnonymizedDataset.py 1f7661b703 Adding database management routines 4 lat temu
copyAnonymizedImagesToOrthanc.py 1f7661b703 Adding database management routines 4 lat temu
copyToOrthanc.py 1fd9314ca6 Initial import 4 lat temu
fillClinicalDataInternational.ipynb 90b4734ea6 Adding iypnb jupyter scripts for database manipulation 3 lat temu
findCandidatesForSchedule.py d027e88d51 Adding findCandidatesForSchedule.py 3 lat temu
getImages.py 1fd9314ca6 Initial import 4 lat temu
iraemmUploadTestPatients.ipynb 90b4734ea6 Adding iypnb jupyter scripts for database manipulation 3 lat temu
makeAnonymizeLinks.py 1fd9314ca6 Initial import 4 lat temu
makeAnonymizedDataset.py 1f7661b703 Adding database management routines 4 lat temu
modifyPatients.py 1f7661b703 Adding database management routines 4 lat temu
populateImagingFromOrthanc.py 07478c6846 Making populateImagingFromOrthance.py use Analysis/Run infrastructure 4 lat temu
populateImagingFromTransferList.py 7df6a921f2 Updating populateImageFromTransferList to update failureStatus 3 lat temu
preprocess.py 0cb3f65861 Adding comments and redirecting gzip to setup.json indicated binary in preprocess.py 3 lat temu
runPython.sh 1cb816f9f9 Merge to core 3 lat temu
runPythonnnUNet.sh f1c4e7b732 Adding un-buffer flag to python for uptodate output 3 lat temu
runSegmentationDM.py 9ae439d111 Adding segmentation configuration files 3 lat temu
runSegmentationnnUNet.py 425922f219 Adding comments to runSegmentationnnUNet.py 3 lat temu
test.py 43c785d716 Adding test.py script 3 lat temu

README

Run with ./runPython.sh script.py