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Split R packages to individual commands since some packages failed to install, a single test showed all packages present after division, but not clear what helped

Andrej 3 weken geleden
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commit
ba61b2871b
1 gewijzigde bestanden met toevoegingen van 16 en 4 verwijderingen
  1. 16 4
      config/web/Dockerfile21

+ 16 - 4
config/web/Dockerfile21

@@ -35,10 +35,22 @@ RUN sudo mkdir -p /data/labkey && \
 
 
 
-RUN mkdir -p /home/labkey/R/site-library &&\
-   export R_LIBS=/home/labkey/R/site-library &&\
-   echo ${R_LIBS} &&\
-   R -e 'install.packages(c("devtools","ggplot2","Rlabkey","ggsurvfit","ggalluvial","gridExtra","comprehenr","ggsci","paletteer","tidyverse","swimplot","gtsummary"))'
+RUN mkdir -p /home/labkey/R/site-library \
+   && export R_LIBS=/home/labkey/R/site-library \
+   && echo ${R_LIBS} \
+   && R -e 'install.packages("devtools")' \
+   && R -e 'install.packages("ggplot2")' \
+   && R -e 'install.packages("Rlabkey")' \
+   && R -e 'install.packages("ggsurvfit")' \
+   && R -e 'install.packages("ggalluvial")' \
+   && R -e 'install.packages("gridExtra")' \
+   && R -e 'install.packages("comprehenr")' \
+   && R -e 'install.packages("ggsci")' \
+   && R -e 'install.packages("paletteer")' \
+   && R -e 'install.packages("tidyverse")'\
+   && R -e 'install.packages("swimplot")'\
+   && R -e 'install.packages("gtsummary")'
+
 
 
 LABEL "name"="labkey21"