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@@ -338,6 +338,8 @@ def importData(pars,filename,getId=getId,modify=modify,\
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# - schema - labkey schema (list/study, d: study)
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# - query - labkey query
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# - additionalVars - values that are constant for the whole dataset, labeled by a valid alias for a labkey field
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+#- idField - designated unique field of the labkey query
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+#- updateAlias - a function to modify aliases based on parameters, e.g. for datasets that take values based on a qualifying field
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skiprows=pars.get('skiprows',0)
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usecols=pars.get('usecols',None)
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@@ -346,6 +348,7 @@ def importData(pars,filename,getId=getId,modify=modify,\
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seqNumOffset=pars.get('seqNumOffset',0)
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additionalVars=pars.get('additionalVars',{})
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idField=pars.get('idField','ParticipantId')
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+ updateAlias=pars.get('updateAlias',lambda x,y: x)
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fields=getFields(pars)
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lookupVars=getVariables(fields,fieldType='LOOKUP')
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@@ -359,6 +362,7 @@ def importData(pars,filename,getId=getId,modify=modify,\
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if debug:
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print(lookupMap)
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alias=getAlias(fields)
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+ alias=updateAlias(alias,pars)
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print(f'aliases: {alias}')
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df=pandas.read_excel(filename,sheet_name=sheet_name,skiprows=skiprows,\
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