studen/labkeyInterface @ 28114bd6f0ebf4808764b1f7d4b8345df909af12

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Andrej 28114bd6f0 Prefering utf8 in parsing response for labkeyDatabaseBrowser		vor 6 Tagen
pythonScripts	8f98e4ce97 Minor changes to testInterface	vor 5 Monaten
LICENSE	623fedc366 Add LICENSE	vor 3 Jahren
Readme.md	c4fd57f4c6 Update Readme.md	vor 4 Jahren
getCSRF.py	e892554ee8 adding missing getCSRF.py	vor 4 Jahren
getFile.py	fbad6ad2e6 Initial import	vor 4 Jahren
labkeyDatabaseBrowser.py	28114bd6f0 Prefering utf8 in parsing response for labkeyDatabaseBrowser	vor 6 Tagen
labkeyFileBrowser.py	9c2df6384c Repairng readFileToBuffer	vor 3 Jahren
labkeyInterface.py	a576a3bb48 Making OSError more verbose in labkeyInterface	vor 5 Monaten
netwo	8bc8eff9c0 Adding network-config-samples-win.json	vor 2 Jahren
network-config-sample.json	fbad6ad2e6 Initial import	vor 4 Jahren

Labkey Python interface

A Python3 urllib3 based interface for communication with the LabKey server. Update over official LabKey version is the use of client certificates to access potentially sensitive sites.

Setup

Update network-config-sample.json with personal information needed to access the site (certificates, keys, username and password) When using labkeyInterface, use the updated file as input to labkeyInterface constructor, ie

ifc=labkeyInterface.labkeyInterface('/path/to/network-config.json')

Use

getFile.py illustrates use to connect to site, collect image and perform image analysis.

Generate private key without password

To connect, a key without password is needed for compliance with urllib3. Generate it with:

openssl rsa -in [file1.key] -out [file2.key]

Readme.md

Labkey Python interface

Setup

Use

Generate private key without password