limfomiPET/templates/radiomics.yaml

setting:
  binWidth: 25
  label: 1
  interpolator: 'sitkBSpline' # This is an enumerated value, here None is not allowed
  resampledPixelSpacing: # This disables resampling, as it is interpreted as None, to enable it, specify spacing in x, y, z as [x, y , z]
  weightingNorm: # If no value is specified, it is interpreted as None
  voxelArrayShift: 0

# Image types to use: "Original" for unfiltered image, for possible filters, see documentation.
imageType:
  Original: {} 
  # for dictionaries / mappings, None values are not allowed, '{}' is interpreted as an empty dictionary

# Featureclasses, from which features must be calculated. If a featureclass is not mentioned, no features are calculated
# for that class. Otherwise, the specified features are calculated, or, if none are specified, all are calculated (excluding redundant/deprecated features).
featureClass:
  # redundant Compactness 1, Compactness 2 an Spherical Disproportion features are disabled by default, they can be
  # enabled by specifying individual feature names (as is done for glcm) and including them in the list.
  shape: 
     - 'VoxelVolume' #total volume
     - 'MeshVolume' #volume from triangular mesh
     - 'SurfaceArea' #area of enclosed shape
  firstorder: 
  # specifying an empty list has the same effect as specifying nothing.
     - 'Maximum' #SUVmax
     - 'Mean' #SUVmean
  glcm:   []
  # Disable SumAverage by specifying all other GLCM features available
  #  - 'Autocorrelation'
  #  - 'JointAverage'
  #  - 'ClusterProminence'
  glrlm: []
  # for lists none values are allowed, in this case, all features are enabled
  glszm: []
  gldm:  []
  # contains deprecated features, but as no individual features are specified, the deprecated features are not enabled