 Andrej
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7197c5d86f
Correcting wrong year conversion
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1 year ago |
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Andrej
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1de965453e
Minor corrections to runSolver
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1 year ago |
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Andrej
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8823ae3ca1
Changing verbosity of runSolver and adding strides to setupYear
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1 year ago |
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Andrej
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74273fb310
solving the read problem
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1 year ago |
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Andrej
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6a544c7e5b
Adding striding for intermediate solution storage
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2 years ago |
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Andrej
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5bab21d7e7
Scaling derivative matrix with weights; implementation of static jacobi for combined system
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2 years ago |
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Andrej
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c8cb3953b6
Adding humanHG_withHairPC to alleviate burden of computing large values with high accuracy, adding a dump compartment that doesn't get computed, removing hairPC references from non hairPC calculation
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2 years ago |
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Andrej
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22584ceb10
Changing output to nt
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2 years ago |
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Andrej
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cf428f7988
Integrated iHG model
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2 years ago |
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Andrej
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e1661f1b9f
Stop buffering intermediate output
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2 years ago |
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Andrej
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da36c0437a
Adding a progress report
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2 years ago |
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Andrej
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2e81ae9e2a
Moving __name__ part to the bottom of the runSolver to help with main being aware of functions that are defined later in the file
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2 years ago |
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Andrej
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2eaedfcd39
Making output reloadable; figuring out variable ordering
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2 years ago |
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Andrej
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332fe9e9cf
Solution reuse infrastructure (to continue on a time curve)
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2 years ago |
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Andrej
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c855b01d02
PC dist components
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2 years ago |
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Andrej
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7646322c7c
Adding diffusion koefficients uncertainties
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2 years ago |
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Andrej
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7f590c0a14
Minor errors
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2 years ago |
 NIX Worker
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7d19cd15b7
Clearing conflicts in runSolver
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2 years ago |
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NIX Worker
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401aa70bd7
Adding __main__ part to runSolver to allow access from analysisInterface
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2 years ago |
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Andrej
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509e220bf5
Removing placenta from humanHG.json and creating (uncomplete) humanHG_pregnancy.json (to avoid zero mass divergent transfer compartments); allowing for interpolation of parameter specific derivatives to qt.txt, sOut.txt; adding write3D and read3D to runSolver to store 3D arrays; some cleanup of setup parsing in runSolver
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2 years ago |
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Andrej
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9e18018d7c
Robustifying against non-function derivatives
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2 years ago |
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Andrej
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523813258e
First remote version
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2 years ago |
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Andrej
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f63187a7c9
Adding model with function only interface
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2 years ago |
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Andrej
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f07dced35c
cleanup
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2 years ago |
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Andrej
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f9b24b19d8
Adding parse coefficients
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2 years ago |
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Andrej
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ec9939ec3a
Adding log-normal convolution
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2 years ago |
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Andrej
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8b7ee24093
First working version of Hg model (no pregnancy yet)
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2 years ago |
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Andrej
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2c8b979174
Adding inital version of human Hg model
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2 years ago |
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Andrej
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ed6ca51151
Setting default to use volumes also for diffusion based bindings between compartments
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2 years ago |
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Andrej
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ddb428d8cb
adding Diazepam, in cotinine, clearance is 10x what is referenced in paper
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2 years ago |
