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Adding test.py slicer script

Andrej 1 jaar geleden
bovenliggende
commit
bbe9982a4c
2 gewijzigde bestanden met toevoegingen van 24 en 0 verwijderingen
  1. 11 0
      pythonScripts/README.md
  2. 13 0
      slicerScripts/test.py

+ 11 - 0
pythonScripts/README.md

@@ -1,3 +1,14 @@
 ### Instructions ###
 
 Look at `clusterAnalysis.ipynb' for a step by step algorithm.
+
+The only required files for analysis are:
+- ../slicerScripts/convertToNRRD.py
+- analysis.py
+- segmentation.py
+- getData.py
+- config.py
+- segmentation.ipynb
+- clusterAnalysis.ipynb
+
+The rest are for backup only.

+ 13 - 0
slicerScripts/test.py

@@ -0,0 +1,13 @@
+import os
+import sys
+import json
+import pathlib
+import slicer
+
+def main(configFile):
+   node=slicer.vtkMRMLScalarVolumeNode()
+
+if __name__=='__main__':
+    main(sys.argv[1])
+    quit()
+