NIX Worker e396c17716 Preparing to run with pixelAnalysis 1 anno fa
..
nrrd_read_write_rensonnet fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
HOWTO fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
README.md fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
analyze.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 anno fa
analyzeIVF.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 anno fa
analyzePixel.m e396c17716 Preparing to run with pixelAnalysis 1 anno fa
analyzePixelIVF.m e396c17716 Preparing to run with pixelAnalysis 1 anno fa
evaluateCenterDiff.m fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
evaluateCenters.m fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
evaluateSingleDiff.m fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
evaluateSingleDiffZero.m fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
extractCenters.m c317e06d8d Version that produced results sent in email to Luka, Oct 28th 2022. 2 anni fa
fitCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 anno fa
fitCentersIVF.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 anno fa
fitCentersPixel.asv fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
fitCentersPixel.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 anno fa
fitCentersPixelIVF.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 anno fa
fitFromClusters.asv fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
fitFromClusters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 anno fa
fitSingle.m fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
fitSingleRamp.m fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
fitSingleZero.m fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
generateCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 anno fa
generateInitialValues.m fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
getData.m fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
loadCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 anno fa
loadData.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 anno fa
loadPixels.m fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
loadResults.m fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
loadSPECTdata.m c317e06d8d Version that produced results sent in email to Luka, Oct 28th 2022. 2 anni fa
loadSegmentation.m fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
loadTime.asv fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
loadTime.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 anno fa
nrrdWriter.m fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
nrrdread.m fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
plotFunctions.m fde4aa8d47 Up to generate centers, including matlab files 2 anni fa
readFitParameters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 anno fa
rfp.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 anno fa
saveCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 anno fa
writeData.m fde4aa8d47 Up to generate centers, including matlab files 2 anni fa

README.md

Usage

Master routines are written in analyze.m. Full usage:

patientId='XXX'
analyze