Commit History

Author SHA1 Message Date
  NIX User 23b4d03e1e Merge branch 'master' of wiscigt.powertheword.com:oil/iraemm 3 years ago
  NIX User 56800cacc0 Skipping images already resolved in populateImagingFromTransferList 3 years ago
  Andrej Studen e452adcbb8 Adding recent scripts, particularly generateFigures.py and updates to segmentationIRAEMM_ONKO.json 3 years ago
  Andrej Studen d18ee3ff86 Correcting spelling error 3 years ago
  Andrej Studen c7f8174426 Adding organ_percentile calculation, runs with segmentation.json 3 years ago
  Andrej Studen 60021e7a8e Adding script use in nnUNet on IRAEMM images 3 years ago
  Andrej Studen fc25bd8249 Merge branch 'master' of wiscigt.powertheword.com:oil/iraemm 3 years ago
  Andrej Studen 0cb3f65861 Adding comments and redirecting gzip to setup.json indicated binary in preprocess.py 3 years ago
  Andrej Studen 425922f219 Adding comments to runSegmentationnnUNet.py 3 years ago
  NIX User 1cb816f9f9 Merge to core 3 years ago
  NIX User daba75cfbe Adding preprocessing template 3 years ago
  NIX User e480f09ed5 Adding -u and flag to runPython 3 years ago
  NIX User 7df6a921f2 Updating populateImageFromTransferList to update failureStatus 3 years ago
  NIX User d027e88d51 Adding findCandidatesForSchedule.py 3 years ago
  Andrej Studen f1c4e7b732 Adding un-buffer flag to python for uptodate output 3 years ago
  Andrej Studen 083ed06079 Changing to nixWrapper 3 years ago
  Andrej Studen ab22d0e9bf Splitting runPython.sh to runPythonnnUNet.sh to use with nnUNet code 3 years ago
  Andrej Studen 9ae439d111 Adding segmentation configuration files 3 years ago
  Andrej Studen 4d0276ab7b Have runPython.sh run within venv, nnUnet set 3 years ago
  Andrej cdb79e7b12 Removing saved_models from irAEMM project (moving it to irAEMMSegmentationModels project) 3 years ago
  Andrej 43c785d716 Adding test.py script 3 years ago
  Andrej 90b4734ea6 Adding iypnb jupyter scripts for database manipulation 3 years ago
  Andrej 14346cae34 minor changes to default parameter values in segmentation.json.sample 3 years ago
  Andrej 7610919def Moving saved_models to irAEMMSegmentationModels project 3 years ago
  Andrej 1bdf95612e Adding automated segmentation script 3 years ago
  Andrej 8a8b58d515 Adding default view as segmentationReview 3 years ago
  Andrej Studen/Merlin cc26fefd7c Making run segmentation for non-divided files 3 years ago
  NIX User e18a635685 Merge branch 'master' of wiscigt.powertheword.com:oil/iraemm 3 years ago
  NIX User 05fa966798 Recent updates 3 years ago
  Andrej Studen/Merlin b52ae890d7 Merge branch 'master' of wiscigt.powertheword.com:oil/iraemm 3 years ago