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Andrej Studen a4d1955133 Update README.md		4 년 전
dicomUtils	ae65c9190e Updates	4 년 전
pythonScripts	ab41342943 Script to put segmentations at the correct places	4 년 전
slicerModule	67ef22559c Adding irAEMMBrowser	4 년 전
README.md	a4d1955133 Update README.md	4 년 전
setup.json.template	b986ecdaba Adding path template for site configuration	4 년 전

Immunotherapy related adverse effects toolbox

Manage images and data related to irAE project.

Slicer module

Installation

Download the code and [dependencies][]

Dependencies

To access LabKey, the python API was used. Anonymization and NIfTI conversion are based on phenomenal nibabel tools. Data storage is provided by Orthanc with associated interface.

Usage

Anonymization must be run as a tomcat8 user for access to data files. Check setup in the anonymization.py and run it with runPython.sh anonymization.py.

README.md

Immunotherapy related adverse effects toolbox

Slicer module

Installation

Dependencies

Usage