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Andrej Studen c87c6e3cc1 Realinging runSegmentationDM to use nixWrapper to load dependencies 1 ano atrás
..
README 53fb46eaa9 Updating to recent version 5 anos atrás
addSegmentations.py 3dec2cb5da Update add segmentations 4 anos atrás
anonymizeImages.py ae65c9190e Updates 4 anos atrás
anonymizeImagesNIfTI.py 53fb46eaa9 Updating to recent version 5 anos atrás
anonymizeSegmentations.py 05fa966798 Recent updates 4 anos atrás
copyAnonymizedDataset.py 5c691d080a Adding copyAnonymizedDataset.py 2 anos atrás
copyAnonymizedImagesToOrthanc.py 1f7661b703 Adding database management routines 4 anos atrás
copyToOrthanc.py 1fd9314ca6 Initial import 5 anos atrás
fillClinicalDataInternational.ipynb 90b4734ea6 Adding iypnb jupyter scripts for database manipulation 3 anos atrás
findCandidatesForSchedule.py d027e88d51 Adding findCandidatesForSchedule.py 3 anos atrás
generateFigures.py 04a1454e76 Robustifying for missing images, mismatches, etc. 3 anos atrás
getImages.py 1fd9314ca6 Initial import 5 anos atrás
iraemmUploadTestPatients.ipynb 90b4734ea6 Adding iypnb jupyter scripts for database manipulation 3 anos atrás
makeAnonymizeLinks.py 1fd9314ca6 Initial import 5 anos atrás
makeAnonymizedDataset.py 1f7661b703 Adding database management routines 4 anos atrás
modifyDataset.py e452adcbb8 Adding recent scripts, particularly generateFigures.py and updates to segmentationIRAEMM_ONKO.json 3 anos atrás
modifyPatients.py 1f7661b703 Adding database management routines 4 anos atrás
organ_percentile.py f50a92ad9c Expanding analysis to additional segmentations in organ_percentile 2 anos atrás
populateImagingFromOrthanc.py 07478c6846 Making populateImagingFromOrthance.py use Analysis/Run infrastructure 4 anos atrás
populateImagingFromTransferList.py f045cc682d Correcting a dangling if clause in populateImagingFromTransferList.py 3 anos atrás
preprocess.py 04a1454e76 Robustifying for missing images, mismatches, etc. 3 anos atrás
runPython.sh 1cb816f9f9 Merge to core 3 anos atrás
runPythonnnUNet.sh f1c4e7b732 Adding un-buffer flag to python for uptodate output 3 anos atrás
runSegmentationDM.py c87c6e3cc1 Realinging runSegmentationDM to use nixWrapper to load dependencies 1 ano atrás
runSegmentationnnUNet.py 04a1454e76 Robustifying for missing images, mismatches, etc. 3 anos atrás
test.py 43c785d716 Adding test.py script 3 anos atrás

README

Run with ./runPython.sh script.py