studen/irAEMM @ d4e0acb3ef90ec102ee6e1ff6c6cad4f245625ab

NIX User d4e0acb3ef Allow populateImaging to detect not only missing images, but multiple matches as well. Signaled by empty CT/PET_orthancId and lines in missingImages		пре 3 година
..
README	53fb46eaa9 Updating to recent version	пре 5 година
addSegmentations.py	3dec2cb5da Update add segmentations	пре 4 година
anonymizeImages.py	ae65c9190e Updates	пре 4 година
anonymizeImagesNIfTI.py	53fb46eaa9 Updating to recent version	пре 5 година
anonymizeSegmentations.py	05fa966798 Recent updates	пре 4 година
copyAnonymizedDataset.py	1f7661b703 Adding database management routines	пре 4 година
copyAnonymizedImagesToOrthanc.py	1f7661b703 Adding database management routines	пре 4 година
copyToOrthanc.py	1fd9314ca6 Initial import	пре 5 година
fillClinicalDataInternational.ipynb	90b4734ea6 Adding iypnb jupyter scripts for database manipulation	пре 3 година
findCandidatesForSchedule.py	d027e88d51 Adding findCandidatesForSchedule.py	пре 3 година
generateFigures.py	957b0c2fff Updates to automatic routines	пре 3 година
getImages.py	1fd9314ca6 Initial import	пре 5 година
iraemmUploadTestPatients.ipynb	90b4734ea6 Adding iypnb jupyter scripts for database manipulation	пре 3 година
makeAnonymizeLinks.py	1fd9314ca6 Initial import	пре 5 година
makeAnonymizedDataset.py	1f7661b703 Adding database management routines	пре 4 година
modifyDataset.py	e452adcbb8 Adding recent scripts, particularly generateFigures.py and updates to segmentationIRAEMM_ONKO.json	пре 3 година
modifyPatients.py	1f7661b703 Adding database management routines	пре 4 година
organ_percentile.py	957b0c2fff Updates to automatic routines	пре 3 година
populateImagingFromOrthanc.py	07478c6846 Making populateImagingFromOrthance.py use Analysis/Run infrastructure	пре 4 година
populateImagingFromTransferList.py	d4e0acb3ef Allow populateImaging to detect not only missing images, but multiple matches as well. Signaled by empty CT/PET_orthancId and lines in missingImages	пре 3 година
preprocess.py	0cb3f65861 Adding comments and redirecting gzip to setup.json indicated binary in preprocess.py	пре 3 година
runPython.sh	1cb816f9f9 Merge to core	пре 3 година
runPythonnnUNet.sh	f1c4e7b732 Adding un-buffer flag to python for uptodate output	пре 3 година
runSegmentationDM.py	9ae439d111 Adding segmentation configuration files	пре 3 година
runSegmentationnnUNet.py	d18ee3ff86 Correcting spelling error	пре 3 година
test.py	43c785d716 Adding test.py script	пре 3 година

		
				README
			
				Run with ./runPython.sh script.py