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Adding radiomics with a threshold of SUV of 4

Andrej Studen @ VBOX před 1 rokem
rodič
revize
4ca1fafe0e
1 změnil soubory, kde provedl 37 přidání a 0 odebrání
  1. 37 0
      templates/radiomics_SUV4.yaml

+ 37 - 0
templates/radiomics_SUV4.yaml

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+setting:
+  binWidth: 25
+  label: 1
+  interpolator: 'sitkBSpline' # This is an enumerated value, here None is not allowed
+  resampledPixelSpacing: # This disables resampling, as it is interpreted as None, to enable it, specify spacing in x, y, z as [x, y , z]
+  weightingNorm: # If no value is specified, it is interpreted as None
+  voxelArrayShift: 0
+  resegmentRange: [4] #only take values of 4 or more
+
+# Image types to use: "Original" for unfiltered image, for possible filters, see documentation.
+imageType:
+  Original: {} 
+  # for dictionaries / mappings, None values are not allowed, '{}' is interpreted as an empty dictionary
+
+# Featureclasses, from which features must be calculated. If a featureclass is not mentioned, no features are calculated
+# for that class. Otherwise, the specified features are calculated, or, if none are specified, all are calculated (excluding redundant/deprecated features).
+featureClass:
+  # redundant Compactness 1, Compactness 2 an Spherical Disproportion features are disabled by default, they can be
+  # enabled by specifying individual feature names (as is done for glcm) and including them in the list.
+  shape: 
+     - 'VoxelVolume' #total volume
+     - 'MeshVolume' #volume from triangular mesh
+     - 'SurfaceArea' #area of enclosed shape
+  firstorder: 
+  # specifying an empty list has the same effect as specifying nothing.
+     - 'Maximum' #SUVmax
+     - 'Mean' #SUVmean
+  glcm:   []
+  # Disable SumAverage by specifying all other GLCM features available
+  #  - 'Autocorrelation'
+  #  - 'JointAverage'
+  #  - 'ClusterProminence'
+  glrlm: []
+  # for lists none values are allowed, in this case, all features are enabled
+  glszm: []
+  gldm:  []
+  # contains deprecated features, but as no individual features are specified, the deprecated features are not enabled