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Adding networkConfig flag to setup will use other server as the one specified in network.json. File named in networkConfig should exist in .labkey directory of the user executing the script
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%!s(int64=2) %!d(string=hai) anos | |
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| pythonScripts | %!s(int64=2) %!d(string=hai) anos | |
| scripts | %!s(int64=2) %!d(string=hai) anos | |
| LICENSE | %!s(int64=4) %!d(string=hai) anos | |
| Readme.md | %!s(int64=4) %!d(string=hai) anos | |
| network-config-sample.json | %!s(int64=4) %!d(string=hai) anos | |
| orthancDatabaseBrowser.py | %!s(int64=4) %!d(string=hai) anos | |
| orthancFileBrowser.py | %!s(int64=4) %!d(string=hai) anos | |
| orthancInterface.py | %!s(int64=4) %!d(string=hai) anos |
Readme.md
Orthanc Python interface
A Python3 urllib3 based interface for communication with the Orthanc server. Provides simple REST API interfaces integrated in python code.
Setup
Update network-config-sample.json with personal information needed to access the site (username and password)
When using orthancInterface, use the updated file as input to orthancInterface constructor, ie
ifc=orthancInterface.orthancInterface('/path/to/network-config.json')
Orthanc configuration file can be merged with the LabKeyInterface configuration file.
Use
Sample usage:
fhome=os.path.expanduser('~')
fconfig=os.path.join(fhome,'.labkey','network.json')
onet=orthancInterface.orthancInterface()
onet.init(fconfig)
ofb=orthancFileBrowser.orthancFileBrowser(onet)
...
#download seriesId to fname
ofb.getZip('series',seriesId,fname)
#upload dicom file
ofb.upload('/path/to/file.dcm')