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Andrej 896929f6c1 Dealing with unexpected errors after collecting multiple variable values		před 10 měsíci
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slicerScripts	e250127660 Changing to Planar contour -> Ribbon model -> labelmap representatation conversion pathway as suggested in Slicer forums https://discourse.slicer.org/t/converting-segmentationnode-to-labelmap-takes-a-long-time-through-python/23696/6	před 1 rokem
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README.md	d528258061 Updating readme	před 1 rokem

DCIS

A project to investigate long term impact of heart irraditaion in breast cancer.

Slicer

This project relates on Slicer. I am using SlicerLabkeyExtension codes to run Slicer on a headless server. Codes in slicerScripts are run via

SlicerLabkeyExtension/slicerScripts/runSlicer.sh [thisProject]/slicerScripts/parseDicom.py config.json

If you are not using headless servers, X is not a problem, and one can run via

Slicer --no-main-window --python-scripts [thisProject]/slicerScripts/parseDicom.py config.json

Code was tested on Slicer-5.4.0-linux-amd64 with SlicerRT.

Based on Labkey database server using labkeyInterface.

Depends on orthancInterface. Orthanc is an open source PACS implementation.