NIX Worker e396c17716 Preparing to run with pixelAnalysis 1 year ago
..
nrrd_read_write_rensonnet fde4aa8d47 Up to generate centers, including matlab files 2 years ago
HOWTO fde4aa8d47 Up to generate centers, including matlab files 2 years ago
README.md fde4aa8d47 Up to generate centers, including matlab files 2 years ago
analyze.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 year ago
analyzeIVF.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 year ago
analyzePixel.m e396c17716 Preparing to run with pixelAnalysis 1 year ago
analyzePixelIVF.m e396c17716 Preparing to run with pixelAnalysis 1 year ago
evaluateCenterDiff.m fde4aa8d47 Up to generate centers, including matlab files 2 years ago
evaluateCenters.m fde4aa8d47 Up to generate centers, including matlab files 2 years ago
evaluateSingleDiff.m fde4aa8d47 Up to generate centers, including matlab files 2 years ago
evaluateSingleDiffZero.m fde4aa8d47 Up to generate centers, including matlab files 2 years ago
extractCenters.m c317e06d8d Version that produced results sent in email to Luka, Oct 28th 2022. 2 years ago
fitCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 year ago
fitCentersIVF.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 year ago
fitCentersPixel.asv fde4aa8d47 Up to generate centers, including matlab files 2 years ago
fitCentersPixel.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 year ago
fitCentersPixelIVF.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 year ago
fitFromClusters.asv fde4aa8d47 Up to generate centers, including matlab files 2 years ago
fitFromClusters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 year ago
fitSingle.m fde4aa8d47 Up to generate centers, including matlab files 2 years ago
fitSingleRamp.m fde4aa8d47 Up to generate centers, including matlab files 2 years ago
fitSingleZero.m fde4aa8d47 Up to generate centers, including matlab files 2 years ago
generateCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 year ago
generateInitialValues.m fde4aa8d47 Up to generate centers, including matlab files 2 years ago
getData.m fde4aa8d47 Up to generate centers, including matlab files 2 years ago
loadCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 year ago
loadData.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 year ago
loadPixels.m fde4aa8d47 Up to generate centers, including matlab files 2 years ago
loadResults.m fde4aa8d47 Up to generate centers, including matlab files 2 years ago
loadSPECTdata.m c317e06d8d Version that produced results sent in email to Luka, Oct 28th 2022. 2 years ago
loadSegmentation.m fde4aa8d47 Up to generate centers, including matlab files 2 years ago
loadTime.asv fde4aa8d47 Up to generate centers, including matlab files 2 years ago
loadTime.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 year ago
nrrdWriter.m fde4aa8d47 Up to generate centers, including matlab files 2 years ago
nrrdread.m fde4aa8d47 Up to generate centers, including matlab files 2 years ago
plotFunctions.m fde4aa8d47 Up to generate centers, including matlab files 2 years ago
readFitParameters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 year ago
rfp.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 year ago
saveCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 year ago
writeData.m fde4aa8d47 Up to generate centers, including matlab files 2 years ago

README.md

Usage

Master routines are written in analyze.m. Full usage:

patientId='XXX'
analyze