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NIX User 23b4d03e1e Merge branch 'master' of wiscigt.powertheword.com:oil/iraemm il y a 3 ans
..
README 53fb46eaa9 Updating to recent version il y a 4 ans
addSegmentations.py 3dec2cb5da Update add segmentations il y a 4 ans
anonymizeImages.py ae65c9190e Updates il y a 4 ans
anonymizeImagesNIfTI.py 53fb46eaa9 Updating to recent version il y a 4 ans
anonymizeSegmentations.py 05fa966798 Recent updates il y a 3 ans
copyAnonymizedDataset.py 1f7661b703 Adding database management routines il y a 4 ans
copyAnonymizedImagesToOrthanc.py 1f7661b703 Adding database management routines il y a 4 ans
copyToOrthanc.py 1fd9314ca6 Initial import il y a 4 ans
fillClinicalDataInternational.ipynb 90b4734ea6 Adding iypnb jupyter scripts for database manipulation il y a 3 ans
findCandidatesForSchedule.py d027e88d51 Adding findCandidatesForSchedule.py il y a 3 ans
generateFigures.py e452adcbb8 Adding recent scripts, particularly generateFigures.py and updates to segmentationIRAEMM_ONKO.json il y a 3 ans
getImages.py 1fd9314ca6 Initial import il y a 4 ans
iraemmUploadTestPatients.ipynb 90b4734ea6 Adding iypnb jupyter scripts for database manipulation il y a 3 ans
makeAnonymizeLinks.py 1fd9314ca6 Initial import il y a 4 ans
makeAnonymizedDataset.py 1f7661b703 Adding database management routines il y a 4 ans
modifyDataset.py e452adcbb8 Adding recent scripts, particularly generateFigures.py and updates to segmentationIRAEMM_ONKO.json il y a 3 ans
modifyPatients.py 1f7661b703 Adding database management routines il y a 4 ans
organ_percentile.py c7f8174426 Adding organ_percentile calculation, runs with segmentation.json il y a 3 ans
populateImagingFromOrthanc.py 07478c6846 Making populateImagingFromOrthance.py use Analysis/Run infrastructure il y a 4 ans
populateImagingFromTransferList.py 56800cacc0 Skipping images already resolved in populateImagingFromTransferList il y a 3 ans
preprocess.py 0cb3f65861 Adding comments and redirecting gzip to setup.json indicated binary in preprocess.py il y a 3 ans
runPython.sh 1cb816f9f9 Merge to core il y a 3 ans
runPythonnnUNet.sh f1c4e7b732 Adding un-buffer flag to python for uptodate output il y a 3 ans
runSegmentationDM.py 9ae439d111 Adding segmentation configuration files il y a 3 ans
runSegmentationnnUNet.py d18ee3ff86 Correcting spelling error il y a 3 ans
test.py 43c785d716 Adding test.py script il y a 3 ans

README

Run with ./runPython.sh script.py