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NIX User 23b4d03e1e Merge branch 'master' of wiscigt.powertheword.com:oil/iraemm 3 jaren geleden
..
README 53fb46eaa9 Updating to recent version 4 jaren geleden
addSegmentations.py 3dec2cb5da Update add segmentations 4 jaren geleden
anonymizeImages.py ae65c9190e Updates 4 jaren geleden
anonymizeImagesNIfTI.py 53fb46eaa9 Updating to recent version 4 jaren geleden
anonymizeSegmentations.py 05fa966798 Recent updates 3 jaren geleden
copyAnonymizedDataset.py 1f7661b703 Adding database management routines 4 jaren geleden
copyAnonymizedImagesToOrthanc.py 1f7661b703 Adding database management routines 4 jaren geleden
copyToOrthanc.py 1fd9314ca6 Initial import 4 jaren geleden
fillClinicalDataInternational.ipynb 90b4734ea6 Adding iypnb jupyter scripts for database manipulation 3 jaren geleden
findCandidatesForSchedule.py d027e88d51 Adding findCandidatesForSchedule.py 3 jaren geleden
generateFigures.py e452adcbb8 Adding recent scripts, particularly generateFigures.py and updates to segmentationIRAEMM_ONKO.json 3 jaren geleden
getImages.py 1fd9314ca6 Initial import 4 jaren geleden
iraemmUploadTestPatients.ipynb 90b4734ea6 Adding iypnb jupyter scripts for database manipulation 3 jaren geleden
makeAnonymizeLinks.py 1fd9314ca6 Initial import 4 jaren geleden
makeAnonymizedDataset.py 1f7661b703 Adding database management routines 4 jaren geleden
modifyDataset.py e452adcbb8 Adding recent scripts, particularly generateFigures.py and updates to segmentationIRAEMM_ONKO.json 3 jaren geleden
modifyPatients.py 1f7661b703 Adding database management routines 4 jaren geleden
organ_percentile.py c7f8174426 Adding organ_percentile calculation, runs with segmentation.json 3 jaren geleden
populateImagingFromOrthanc.py 07478c6846 Making populateImagingFromOrthance.py use Analysis/Run infrastructure 4 jaren geleden
populateImagingFromTransferList.py 56800cacc0 Skipping images already resolved in populateImagingFromTransferList 3 jaren geleden
preprocess.py 0cb3f65861 Adding comments and redirecting gzip to setup.json indicated binary in preprocess.py 3 jaren geleden
runPython.sh 1cb816f9f9 Merge to core 3 jaren geleden
runPythonnnUNet.sh f1c4e7b732 Adding un-buffer flag to python for uptodate output 3 jaren geleden
runSegmentationDM.py 9ae439d111 Adding segmentation configuration files 3 jaren geleden
runSegmentationnnUNet.py d18ee3ff86 Correcting spelling error 3 jaren geleden
test.py 43c785d716 Adding test.py script 3 jaren geleden

README

Run with ./runPython.sh script.py