Andrej Studen @ VBOX 7dad40c53c Removing minor errors in NPZ routines пре 8 месеци
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README.md 0ea84c60d5 Changing README to md format, allowing pre-configured path for model in testConfig пре 1 година
addSegmentations.py 3dec2cb5da Update add segmentations пре 3 година
anonymizeImages.py ae65c9190e Updates пре 4 година
anonymizeImagesNIfTI.py 53fb46eaa9 Updating to recent version пре 4 година
anonymizeSegmentations.py 05fa966798 Recent updates пре 3 година
copyAnonymizedDataset.py 5c691d080a Adding copyAnonymizedDataset.py пре 1 година
copyAnonymizedImagesToOrthanc.py 1f7661b703 Adding database management routines пре 4 година
copyToOrthanc.py 1fd9314ca6 Initial import пре 4 година
fillClinicalDataInternational.ipynb 90b4734ea6 Adding iypnb jupyter scripts for database manipulation пре 3 година
findCandidatesForSchedule.py d027e88d51 Adding findCandidatesForSchedule.py пре 3 година
generateFigures.py 04a1454e76 Robustifying for missing images, mismatches, etc. пре 3 година
generateNPZ.ipynb 7dad40c53c Removing minor errors in NPZ routines пре 8 месеци
generateNPZ.py 7dad40c53c Removing minor errors in NPZ routines пре 8 месеци
getImages.py 1fd9314ca6 Initial import пре 4 година
iraemmUploadTestPatients.ipynb 90b4734ea6 Adding iypnb jupyter scripts for database manipulation пре 3 година
makeAnonymizeLinks.py 1fd9314ca6 Initial import пре 4 година
makeAnonymizedDataset.py 1f7661b703 Adding database management routines пре 4 година
modifyDataset.py e452adcbb8 Adding recent scripts, particularly generateFigures.py and updates to segmentationIRAEMM_ONKO.json пре 3 година
modifyPatients.py 1f7661b703 Adding database management routines пре 4 година
organ_percentile.py f50a92ad9c Expanding analysis to additional segmentations in organ_percentile пре 1 година
parseNPZ.py 7dad40c53c Removing minor errors in NPZ routines пре 8 месеци
populateImagingFromOrthanc.py 07478c6846 Making populateImagingFromOrthance.py use Analysis/Run infrastructure пре 3 година
populateImagingFromTransferList.py f045cc682d Correcting a dangling if clause in populateImagingFromTransferList.py пре 2 година
preprocess.py 04a1454e76 Robustifying for missing images, mismatches, etc. пре 3 година
runPython.sh 1cb816f9f9 Merge to core пре 3 година
runPythonnnUNet.sh f1c4e7b732 Adding un-buffer flag to python for uptodate output пре 3 година
runSegmentationDM.py 6ddf9fcc67 Adding entry filter to allow for selection in processing, also, debug parameter in template stops processing after the first entry пре 1 година
runSegmentationnnUNet.py 04a1454e76 Robustifying for missing images, mismatches, etc. пре 3 година
test.py 43c785d716 Adding test.py script пре 3 година

README.md

Run with ./runPython.sh script.py