 Andrej Studen
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3bd671d169
Switching to pypi nixWrapper
|
2 viikkoa sitten |
|
Andrej Studen
|
77d1d4e022
Switching to pypi nixWrapper
|
2 viikkoa sitten |
|
Andrej Studen
|
64d836ed75
Modify segment colors
|
1 kuukausi sitten |
|
Andrej Studen
|
a3c6ec9200
Adding spacer between clear and save buttons, adding a confirmation dialog on clear, adding a timer on save button to change it to gray after 5 seconds
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1 kuukausi sitten |
 nixWorker
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c0ca112116
Clearing syntay errors in statUtils.py
|
1 kuukausi sitten |
|
nixWorker
|
246d0b8a3a
Protect agains missing images in Imaging dataset in statUtils.py
|
1 kuukausi sitten |
|
nixWorker
|
15bde3a8c0
Rounding nvoxels to nearest integer, adding ERROR to lines reporting difficulties with upload, and reporting segmentation dataset when in getSegmentations for statUtils.py
|
1 kuukausi sitten |
|
nixWorker
|
87efe7325a
Adding petField and segmentationDataset fields to setup statistics.json
|
1 kuukausi sitten |
|
nixWorker
|
29dff5049a
Allowing for getSegmentations to look in setup set segmentationDataset
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1 kuukausi sitten |
|
nixWorker
|
c28edd7418
Adding multiple threshold strategies plus adjustments for segmentation dataset other than Segmentations and pet field other than petResampled
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1 kuukausi sitten |
 Andrej
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76e30449c7
Removing debug in imageBrowser.py
|
1 kuukausi sitten |
|
Andrej
|
09da6fe82c
Updating conversion format in imageBrowser.py
|
1 kuukausi sitten |
|
Andrej
|
4c8ff9e8dd
Debugging parsing dates in imageBrowser.py
|
1 kuukausi sitten |
|
Andrej
|
9cd5813bbb
Updating parsing dates from labkey in imageBrowser
|
1 kuukausi sitten |
|
Andrej Studen
|
2c6ad66e38
Adding update prospective setup file
|
3 kuukautta sitten |
|
Andrej Studen
|
b7952debe1
minor error in imageBrowser
|
3 kuukautta sitten |
|
Andrej Studen
|
7ab857e756
adding possibility to overrride petField and ctField in configuration file
|
3 kuukautta sitten |
|
Andrej Studen
|
c7da6138e9
Update to prospective configuration
|
4 kuukautta sitten |
|
Andrej Studen
|
92ed17c6be
adding ORLPET_iBrowser.json configuration file as a valid option
|
9 kuukautta sitten |
|
nixWorker
|
e5a5e21db9
runStat cleanup, adding forceGlobal, forceLiver15, forceLiver and forceSUVMax flags, doUpload flag, and changing liver15 threshold formula
|
10 kuukautta sitten |
|
Andrej Studen
|
f9f17be78d
Correcting for missing liver segmentation in threshold calculation when liver and disease are in different PET files
|
10 kuukautta sitten |
|
Andrej Studen
|
495c4bbe80
Updates to anonymization routine
|
10 kuukautta sitten |
|
Andrej Studen
|
7a794a39d6
Updating to match JSON parsed response from modifyRows
|
11 kuukautta sitten |
|
Andrej Studen
|
a56baa528e
Adding Liver1p5
|
11 kuukautta sitten |
 NIX User
|
a055c84b39
Adding anonymization routine
|
1 vuosi sitten |
|
Andrej Studen
|
bbf638cff4
Removing encoding from imageBrowser, now all JSON conversion is done by labkeyInterface
|
1 vuosi sitten |
|
Andrej Studen
|
c43a3c1484
Adding overlay to preprocess.py
|
1 vuosi sitten |
|
Andrej Studen
|
4ac0852fb0
Having preprocess.py sensitive to needsResampling flag in Imaging1 dataset
|
1 vuosi sitten |
|
Andrej Studen
|
039a6834cf
Adding metastases as a default segment
|
1 vuosi sitten |
|
Andrej Studen
|
33b3142924
Adding SD as parameters for image quantification
|
1 vuosi sitten |
