 Andrej
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c50c321b24
Adding helper script for sorting data
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il y a 1 an |
|
Andrej
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146d1bf0f8
Modifying analyzePixelIVF.m to run with Slicer generated segmentations
|
il y a 1 an |
 Andrej Studen@Labkey-KNM
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e556aa5b32
Adding update status function to report progress
|
il y a 1 an |
|
Andrej
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a1a06988c7
Segmentation, first try
|
il y a 1 an |
|
Andrej
|
1dbfdd22ef
Adding imageBrowser
|
il y a 1 an |
|
Andrej
|
ca707226aa
Adding imageBrowser and licensing under Mozilla license
|
il y a 1 an |
|
Andrej Studen@Labkey-KNM
|
8227bd308d
Adding virtualenv related requirements.txt
|
il y a 1 an |
 NIX Worker
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adac3b94ea
Delegating and implementing filter parsing in config.py
|
il y a 1 an |
|
NIX Worker
|
905b4e8c9c
Delegating filter parsing to config
|
il y a 1 an |
|
NIX Worker
|
6f536a609c
operable doSummary.py
|
il y a 1 an |
|
NIX Worker
|
cf5e2971b4
Adding doSummary.py
|
il y a 1 an |
|
Andrej
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87d8bfd583
validating summaryIVF
|
il y a 1 an |
|
NIX Worker
|
5e8f30d99f
Functionality to perfrom doPixelAnalysis.py
|
il y a 1 an |
|
Andrej
|
15edb29494
Update to jupyter
|
il y a 1 an |
|
Andrej
|
513370ed9e
Updates to getData and segmentation
|
il y a 1 an |
|
NIX Worker
|
e396c17716
Preparing to run with pixelAnalysis
|
il y a 1 an |
|
Andrej
|
dcc9d0f7be
Updates to jupyter
|
il y a 1 an |
|
Andrej
|
1d6cca45c3
Adding vmax as parameters to plotSegmentation
|
il y a 1 an |
|
Andrej
|
0a768d2e5c
Adding plotSegmentation do segmentation.py
|
il y a 1 an |
|
Andrej
|
94c1f26a25
Addint getPatientNIM to getData
|
il y a 1 an |
|
Andrej
|
345e0bdcec
Minor updates to scripts, config file is also used in vangogh mode
|
il y a 1 an |
|
NIX Worker
|
29a112f380
Adding calculateCenters.py and doAnalysis.py as drivers to replace equivalent shell scripts, so python can start matlab
|
il y a 1 an |
|
NIX Worker
|
26556c4d35
Making test.py verbose
|
il y a 1 an |
|
NIX Worker
|
881d83b4c7
Making convertToNRRD.py robust to starting it from anywhere in path, using __file__ variable to determine where to find pythonScripts
|
il y a 1 an |
|
NIX Worker
|
8d56a9f074
Rearranging scripts to do IO and parse config
|
il y a 1 an |
|
NIX Worker
|
e3c0099dab
Making analysis run matlab scripts directly
|
il y a 1 an |
|
NIX Worker
|
05aa81223b
Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write
|
il y a 1 an |
|
Andrej
|
bbe9982a4c
Adding test.py slicer script
|
il y a 1 an |
|
Andrej
|
034e09bc30
Modified notebooks
|
il y a 2 ans |
|
Andrej
|
2a634e8c4c
Adding analysis classes to a module
|
il y a 2 ans |
