Commit History

Autor SHA1 Mensaxe Data
  Andrej Studen@Labkey-KNM 8227bd308d Adding virtualenv related requirements.txt hai 1 ano
  NIX Worker adac3b94ea Delegating and implementing filter parsing in config.py hai 1 ano
  NIX Worker 905b4e8c9c Delegating filter parsing to config hai 1 ano
  NIX Worker 6f536a609c operable doSummary.py hai 1 ano
  NIX Worker cf5e2971b4 Adding doSummary.py hai 1 ano
  Andrej 87d8bfd583 validating summaryIVF hai 1 ano
  NIX Worker 5e8f30d99f Functionality to perfrom doPixelAnalysis.py hai 1 ano
  Andrej 15edb29494 Update to jupyter hai 1 ano
  Andrej 513370ed9e Updates to getData and segmentation hai 1 ano
  NIX Worker e396c17716 Preparing to run with pixelAnalysis hai 1 ano
  Andrej dcc9d0f7be Updates to jupyter hai 1 ano
  Andrej 1d6cca45c3 Adding vmax as parameters to plotSegmentation hai 1 ano
  Andrej 0a768d2e5c Adding plotSegmentation do segmentation.py hai 1 ano
  Andrej 94c1f26a25 Addint getPatientNIM to getData hai 1 ano
  Andrej 345e0bdcec Minor updates to scripts, config file is also used in vangogh mode hai 1 ano
  NIX Worker 29a112f380 Adding calculateCenters.py and doAnalysis.py as drivers to replace equivalent shell scripts, so python can start matlab hai 1 ano
  NIX Worker 26556c4d35 Making test.py verbose hai 1 ano
  NIX Worker 881d83b4c7 Making convertToNRRD.py robust to starting it from anywhere in path, using __file__ variable to determine where to find pythonScripts hai 1 ano
  NIX Worker 8d56a9f074 Rearranging scripts to do IO and parse config hai 1 ano
  NIX Worker e3c0099dab Making analysis run matlab scripts directly hai 1 ano
  NIX Worker 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hai 1 ano
  Andrej bbe9982a4c Adding test.py slicer script hai 1 ano
  Andrej 034e09bc30 Modified notebooks %!s(int64=2) %!d(string=hai) anos
  Andrej 2a634e8c4c Adding analysis classes to a module %!s(int64=2) %!d(string=hai) anos
  Andrej 8f169c6170 Moving segmentation functions from notebook to package %!s(int64=2) %!d(string=hai) anos
  Andrej 8ee45b28e9 Changed number of global fit minimum search to 40 for fitCentersPixelIVF.mg %!s(int64=2) %!d(string=hai) anos
  Andrej c317e06d8d Version that produced results sent in email to Luka, Oct 28th 2022. %!s(int64=2) %!d(string=hai) anos
  Andrej fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
  Andrej addd6a19a1 Removing files from other projects %!s(int64=2) %!d(string=hai) anos
  Andrej c6d5d1c806 Removing files from other projects %!s(int64=2) %!d(string=hai) anos