Andrej bf13fea75b Compact way to generate values for the fits in matlab преди 1 година
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nrrd_read_write_rensonnet fde4aa8d47 Up to generate centers, including matlab files преди 2 години
HOWTO fde4aa8d47 Up to generate centers, including matlab files преди 2 години
README.md fde4aa8d47 Up to generate centers, including matlab files преди 2 години
analyze.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion преди 1 година
analyzeIVF.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion преди 1 година
analyzePixel.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion преди 1 година
analyzePixelIVF.m 85cf688137 Adding matlab scripts to handle nrrd segmentations преди 1 година
evaluateCenterDiff.m fde4aa8d47 Up to generate centers, including matlab files преди 2 години
evaluateCenters.m fde4aa8d47 Up to generate centers, including matlab files преди 2 години
evaluateSingleDiff.m fde4aa8d47 Up to generate centers, including matlab files преди 2 години
evaluateSingleDiffZero.m fde4aa8d47 Up to generate centers, including matlab files преди 2 години
extractCenters.m 74028781c2 Changing extractCenters to layout with first column for region index; multiple entries can be made for a single region преди 1 година
extractPixelsFromNrrd.m 85cf688137 Adding matlab scripts to handle nrrd segmentations преди 1 година
fitCenters.m e098801656 Cosmetic changes to fitCenters преди 1 година
fitCentersIVF.m 285e42984e Adding ploting of IVF fits in fitCentersIVF преди 1 година
fitCentersPixel.asv fde4aa8d47 Up to generate centers, including matlab files преди 2 години
fitCentersPixel.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write преди 1 година
fitCentersPixelIVF.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write преди 1 година
fitFromClusters.asv fde4aa8d47 Up to generate centers, including matlab files преди 2 години
fitFromClusters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write преди 1 година
fitSingle.m 032bbc54b8 Correcting fit functions to use delays, in some rare conditions non-offseted time values were still used преди 1 година
fitSingleRamp.m fde4aa8d47 Up to generate centers, including matlab files преди 2 години
fitSingleZero.m 032bbc54b8 Correcting fit functions to use delays, in some rare conditions non-offseted time values were still used преди 1 година
generateCenters.m 18e26aadd9 Adding quit to generateCenters преди 1 година
generateInitialValues.m fde4aa8d47 Up to generate centers, including matlab files преди 2 години
getData.m fde4aa8d47 Up to generate centers, including matlab files преди 2 години
globalValueGenerator.m bf13fea75b Compact way to generate values for the fits in matlab преди 1 година
loadCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write преди 1 година
loadData.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write преди 1 година
loadPixels.m fde4aa8d47 Up to generate centers, including matlab files преди 2 години
loadResults.m fde4aa8d47 Up to generate centers, including matlab files преди 2 години
loadSPECTdata.m c317e06d8d Version that produced results sent in email to Luka, Oct 28th 2022. преди 2 години
loadSegmentation.m fde4aa8d47 Up to generate centers, including matlab files преди 2 години
loadTime.asv fde4aa8d47 Up to generate centers, including matlab files преди 2 години
loadTime.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write преди 1 година
nrrdWriter.m fde4aa8d47 Up to generate centers, including matlab files преди 2 години
nrrdread.m fde4aa8d47 Up to generate centers, including matlab files преди 2 години
plotFunctions.m fde4aa8d47 Up to generate centers, including matlab files преди 2 години
readFitParameters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write преди 1 година
rfp.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write преди 1 година
saveCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write преди 1 година
writeData.m fde4aa8d47 Up to generate centers, including matlab files преди 2 години

README.md

Usage

Master routines are written in analyze.m. Full usage:

patientId='XXX'
analyze