Andrej bf13fea75b Compact way to generate values for the fits in matlab 1 рік тому
..
nrrd_read_write_rensonnet fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
HOWTO fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
README.md fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
analyze.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion 1 рік тому
analyzeIVF.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion 1 рік тому
analyzePixel.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion 1 рік тому
analyzePixelIVF.m 85cf688137 Adding matlab scripts to handle nrrd segmentations 1 рік тому
evaluateCenterDiff.m fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
evaluateCenters.m fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
evaluateSingleDiff.m fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
evaluateSingleDiffZero.m fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
extractCenters.m 74028781c2 Changing extractCenters to layout with first column for region index; multiple entries can be made for a single region 1 рік тому
extractPixelsFromNrrd.m 85cf688137 Adding matlab scripts to handle nrrd segmentations 1 рік тому
fitCenters.m e098801656 Cosmetic changes to fitCenters 1 рік тому
fitCentersIVF.m 285e42984e Adding ploting of IVF fits in fitCentersIVF 1 рік тому
fitCentersPixel.asv fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
fitCentersPixel.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 рік тому
fitCentersPixelIVF.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 рік тому
fitFromClusters.asv fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
fitFromClusters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 рік тому
fitSingle.m 032bbc54b8 Correcting fit functions to use delays, in some rare conditions non-offseted time values were still used 1 рік тому
fitSingleRamp.m fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
fitSingleZero.m 032bbc54b8 Correcting fit functions to use delays, in some rare conditions non-offseted time values were still used 1 рік тому
generateCenters.m 18e26aadd9 Adding quit to generateCenters 1 рік тому
generateInitialValues.m fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
getData.m fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
globalValueGenerator.m bf13fea75b Compact way to generate values for the fits in matlab 1 рік тому
loadCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 рік тому
loadData.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 рік тому
loadPixels.m fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
loadResults.m fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
loadSPECTdata.m c317e06d8d Version that produced results sent in email to Luka, Oct 28th 2022. 2 роки тому
loadSegmentation.m fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
loadTime.asv fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
loadTime.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 рік тому
nrrdWriter.m fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
nrrdread.m fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
plotFunctions.m fde4aa8d47 Up to generate centers, including matlab files 2 роки тому
readFitParameters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 рік тому
rfp.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 рік тому
saveCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 рік тому
writeData.m fde4aa8d47 Up to generate centers, including matlab files 2 роки тому

README.md

Usage

Master routines are written in analyze.m. Full usage:

patientId='XXX'
analyze