Andrej bf13fea75b Compact way to generate values for the fits in matlab vor 1 Jahr
..
nrrd_read_write_rensonnet fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
HOWTO fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
README.md fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
analyze.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion vor 1 Jahr
analyzeIVF.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion vor 1 Jahr
analyzePixel.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion vor 1 Jahr
analyzePixelIVF.m 85cf688137 Adding matlab scripts to handle nrrd segmentations vor 1 Jahr
evaluateCenterDiff.m fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
evaluateCenters.m fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
evaluateSingleDiff.m fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
evaluateSingleDiffZero.m fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
extractCenters.m 74028781c2 Changing extractCenters to layout with first column for region index; multiple entries can be made for a single region vor 1 Jahr
extractPixelsFromNrrd.m 85cf688137 Adding matlab scripts to handle nrrd segmentations vor 1 Jahr
fitCenters.m e098801656 Cosmetic changes to fitCenters vor 1 Jahr
fitCentersIVF.m 285e42984e Adding ploting of IVF fits in fitCentersIVF vor 1 Jahr
fitCentersPixel.asv fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
fitCentersPixel.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write vor 1 Jahr
fitCentersPixelIVF.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write vor 1 Jahr
fitFromClusters.asv fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
fitFromClusters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write vor 1 Jahr
fitSingle.m 032bbc54b8 Correcting fit functions to use delays, in some rare conditions non-offseted time values were still used vor 1 Jahr
fitSingleRamp.m fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
fitSingleZero.m 032bbc54b8 Correcting fit functions to use delays, in some rare conditions non-offseted time values were still used vor 1 Jahr
generateCenters.m 18e26aadd9 Adding quit to generateCenters vor 1 Jahr
generateInitialValues.m fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
getData.m fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
globalValueGenerator.m bf13fea75b Compact way to generate values for the fits in matlab vor 1 Jahr
loadCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write vor 1 Jahr
loadData.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write vor 1 Jahr
loadPixels.m fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
loadResults.m fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
loadSPECTdata.m c317e06d8d Version that produced results sent in email to Luka, Oct 28th 2022. vor 2 Jahren
loadSegmentation.m fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
loadTime.asv fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
loadTime.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write vor 1 Jahr
nrrdWriter.m fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
nrrdread.m fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
plotFunctions.m fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren
readFitParameters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write vor 1 Jahr
rfp.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write vor 1 Jahr
saveCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write vor 1 Jahr
writeData.m fde4aa8d47 Up to generate centers, including matlab files vor 2 Jahren

README.md

Usage

Master routines are written in analyze.m. Full usage:

patientId='XXX'
analyze