Andrej bf13fea75b Compact way to generate values for the fits in matlab hai 1 ano
..
nrrd_read_write_rensonnet fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
HOWTO fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
README.md fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
analyze.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion hai 1 ano
analyzeIVF.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion hai 1 ano
analyzePixel.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion hai 1 ano
analyzePixelIVF.m 85cf688137 Adding matlab scripts to handle nrrd segmentations hai 1 ano
evaluateCenterDiff.m fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
evaluateCenters.m fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
evaluateSingleDiff.m fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
evaluateSingleDiffZero.m fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
extractCenters.m 74028781c2 Changing extractCenters to layout with first column for region index; multiple entries can be made for a single region hai 1 ano
extractPixelsFromNrrd.m 85cf688137 Adding matlab scripts to handle nrrd segmentations hai 1 ano
fitCenters.m e098801656 Cosmetic changes to fitCenters hai 1 ano
fitCentersIVF.m 285e42984e Adding ploting of IVF fits in fitCentersIVF hai 1 ano
fitCentersPixel.asv fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
fitCentersPixel.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hai 1 ano
fitCentersPixelIVF.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hai 1 ano
fitFromClusters.asv fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
fitFromClusters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hai 1 ano
fitSingle.m 032bbc54b8 Correcting fit functions to use delays, in some rare conditions non-offseted time values were still used hai 1 ano
fitSingleRamp.m fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
fitSingleZero.m 032bbc54b8 Correcting fit functions to use delays, in some rare conditions non-offseted time values were still used hai 1 ano
generateCenters.m 18e26aadd9 Adding quit to generateCenters hai 1 ano
generateInitialValues.m fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
getData.m fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
globalValueGenerator.m bf13fea75b Compact way to generate values for the fits in matlab hai 1 ano
loadCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hai 1 ano
loadData.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hai 1 ano
loadPixels.m fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
loadResults.m fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
loadSPECTdata.m c317e06d8d Version that produced results sent in email to Luka, Oct 28th 2022. %!s(int64=2) %!d(string=hai) anos
loadSegmentation.m fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
loadTime.asv fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
loadTime.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hai 1 ano
nrrdWriter.m fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
nrrdread.m fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
plotFunctions.m fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos
readFitParameters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hai 1 ano
rfp.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hai 1 ano
saveCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hai 1 ano
writeData.m fde4aa8d47 Up to generate centers, including matlab files %!s(int64=2) %!d(string=hai) anos

README.md

Usage

Master routines are written in analyze.m. Full usage:

patientId='XXX'
analyze