Andrej bf13fea75b Compact way to generate values for the fits in matlab 1 год назад
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nrrd_read_write_rensonnet fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
HOWTO fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
README.md fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
analyze.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion 1 год назад
analyzeIVF.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion 1 год назад
analyzePixel.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion 1 год назад
analyzePixelIVF.m 85cf688137 Adding matlab scripts to handle nrrd segmentations 1 год назад
evaluateCenterDiff.m fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
evaluateCenters.m fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
evaluateSingleDiff.m fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
evaluateSingleDiffZero.m fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
extractCenters.m 74028781c2 Changing extractCenters to layout with first column for region index; multiple entries can be made for a single region 1 год назад
extractPixelsFromNrrd.m 85cf688137 Adding matlab scripts to handle nrrd segmentations 1 год назад
fitCenters.m e098801656 Cosmetic changes to fitCenters 1 год назад
fitCentersIVF.m 285e42984e Adding ploting of IVF fits in fitCentersIVF 1 год назад
fitCentersPixel.asv fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
fitCentersPixel.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 год назад
fitCentersPixelIVF.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 год назад
fitFromClusters.asv fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
fitFromClusters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 год назад
fitSingle.m 032bbc54b8 Correcting fit functions to use delays, in some rare conditions non-offseted time values were still used 1 год назад
fitSingleRamp.m fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
fitSingleZero.m 032bbc54b8 Correcting fit functions to use delays, in some rare conditions non-offseted time values were still used 1 год назад
generateCenters.m 18e26aadd9 Adding quit to generateCenters 1 год назад
generateInitialValues.m fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
getData.m fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
globalValueGenerator.m bf13fea75b Compact way to generate values for the fits in matlab 1 год назад
loadCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 год назад
loadData.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 год назад
loadPixels.m fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
loadResults.m fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
loadSPECTdata.m c317e06d8d Version that produced results sent in email to Luka, Oct 28th 2022. 2 лет назад
loadSegmentation.m fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
loadTime.asv fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
loadTime.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 год назад
nrrdWriter.m fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
nrrdread.m fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
plotFunctions.m fde4aa8d47 Up to generate centers, including matlab files 2 лет назад
readFitParameters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 год назад
rfp.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 год назад
saveCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 год назад
writeData.m fde4aa8d47 Up to generate centers, including matlab files 2 лет назад

README.md

Usage

Master routines are written in analyze.m. Full usage:

patientId='XXX'
analyze