Andrej bf13fea75b Compact way to generate values for the fits in matlab 1 vuosi sitten
..
nrrd_read_write_rensonnet fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
HOWTO fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
README.md fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
analyze.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion 1 vuosi sitten
analyzeIVF.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion 1 vuosi sitten
analyzePixel.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion 1 vuosi sitten
analyzePixelIVF.m 85cf688137 Adding matlab scripts to handle nrrd segmentations 1 vuosi sitten
evaluateCenterDiff.m fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
evaluateCenters.m fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
evaluateSingleDiff.m fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
evaluateSingleDiffZero.m fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
extractCenters.m 74028781c2 Changing extractCenters to layout with first column for region index; multiple entries can be made for a single region 1 vuosi sitten
extractPixelsFromNrrd.m 85cf688137 Adding matlab scripts to handle nrrd segmentations 1 vuosi sitten
fitCenters.m e098801656 Cosmetic changes to fitCenters 1 vuosi sitten
fitCentersIVF.m 285e42984e Adding ploting of IVF fits in fitCentersIVF 1 vuosi sitten
fitCentersPixel.asv fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
fitCentersPixel.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 vuosi sitten
fitCentersPixelIVF.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 vuosi sitten
fitFromClusters.asv fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
fitFromClusters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 vuosi sitten
fitSingle.m 032bbc54b8 Correcting fit functions to use delays, in some rare conditions non-offseted time values were still used 1 vuosi sitten
fitSingleRamp.m fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
fitSingleZero.m 032bbc54b8 Correcting fit functions to use delays, in some rare conditions non-offseted time values were still used 1 vuosi sitten
generateCenters.m 18e26aadd9 Adding quit to generateCenters 1 vuosi sitten
generateInitialValues.m fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
getData.m fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
globalValueGenerator.m bf13fea75b Compact way to generate values for the fits in matlab 1 vuosi sitten
loadCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 vuosi sitten
loadData.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 vuosi sitten
loadPixels.m fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
loadResults.m fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
loadSPECTdata.m c317e06d8d Version that produced results sent in email to Luka, Oct 28th 2022. 2 vuotta sitten
loadSegmentation.m fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
loadTime.asv fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
loadTime.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 vuosi sitten
nrrdWriter.m fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
nrrdread.m fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
plotFunctions.m fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten
readFitParameters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 vuosi sitten
rfp.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 vuosi sitten
saveCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write 1 vuosi sitten
writeData.m fde4aa8d47 Up to generate centers, including matlab files 2 vuotta sitten

README.md

Usage

Master routines are written in analyze.m. Full usage:

patientId='XXX'
analyze