Andrej bf13fea75b Compact way to generate values for the fits in matlab hace 1 año
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nrrd_read_write_rensonnet fde4aa8d47 Up to generate centers, including matlab files hace 2 años
HOWTO fde4aa8d47 Up to generate centers, including matlab files hace 2 años
README.md fde4aa8d47 Up to generate centers, including matlab files hace 2 años
analyze.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion hace 1 año
analyzeIVF.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion hace 1 año
analyzePixel.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion hace 1 año
analyzePixelIVF.m 85cf688137 Adding matlab scripts to handle nrrd segmentations hace 1 año
evaluateCenterDiff.m fde4aa8d47 Up to generate centers, including matlab files hace 2 años
evaluateCenters.m fde4aa8d47 Up to generate centers, including matlab files hace 2 años
evaluateSingleDiff.m fde4aa8d47 Up to generate centers, including matlab files hace 2 años
evaluateSingleDiffZero.m fde4aa8d47 Up to generate centers, including matlab files hace 2 años
extractCenters.m 74028781c2 Changing extractCenters to layout with first column for region index; multiple entries can be made for a single region hace 1 año
extractPixelsFromNrrd.m 85cf688137 Adding matlab scripts to handle nrrd segmentations hace 1 año
fitCenters.m e098801656 Cosmetic changes to fitCenters hace 1 año
fitCentersIVF.m 285e42984e Adding ploting of IVF fits in fitCentersIVF hace 1 año
fitCentersPixel.asv fde4aa8d47 Up to generate centers, including matlab files hace 2 años
fitCentersPixel.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hace 1 año
fitCentersPixelIVF.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hace 1 año
fitFromClusters.asv fde4aa8d47 Up to generate centers, including matlab files hace 2 años
fitFromClusters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hace 1 año
fitSingle.m 032bbc54b8 Correcting fit functions to use delays, in some rare conditions non-offseted time values were still used hace 1 año
fitSingleRamp.m fde4aa8d47 Up to generate centers, including matlab files hace 2 años
fitSingleZero.m 032bbc54b8 Correcting fit functions to use delays, in some rare conditions non-offseted time values were still used hace 1 año
generateCenters.m 18e26aadd9 Adding quit to generateCenters hace 1 año
generateInitialValues.m fde4aa8d47 Up to generate centers, including matlab files hace 2 años
getData.m fde4aa8d47 Up to generate centers, including matlab files hace 2 años
globalValueGenerator.m bf13fea75b Compact way to generate values for the fits in matlab hace 1 año
loadCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hace 1 año
loadData.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hace 1 año
loadPixels.m fde4aa8d47 Up to generate centers, including matlab files hace 2 años
loadResults.m fde4aa8d47 Up to generate centers, including matlab files hace 2 años
loadSPECTdata.m c317e06d8d Version that produced results sent in email to Luka, Oct 28th 2022. hace 2 años
loadSegmentation.m fde4aa8d47 Up to generate centers, including matlab files hace 2 años
loadTime.asv fde4aa8d47 Up to generate centers, including matlab files hace 2 años
loadTime.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hace 1 año
nrrdWriter.m fde4aa8d47 Up to generate centers, including matlab files hace 2 años
nrrdread.m fde4aa8d47 Up to generate centers, including matlab files hace 2 años
plotFunctions.m fde4aa8d47 Up to generate centers, including matlab files hace 2 años
readFitParameters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hace 1 año
rfp.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hace 1 año
saveCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write hace 1 año
writeData.m fde4aa8d47 Up to generate centers, including matlab files hace 2 años

README.md

Usage

Master routines are written in analyze.m. Full usage:

patientId='XXX'
analyze