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dynamicSPECT
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matlab
Andrej bf13fea75b Compact way to generate values for the fits in matlab před 1 rokem
..
nrrd_read_write_rensonnet fde4aa8d47 Up to generate centers, including matlab files před 2 roky
HOWTO fde4aa8d47 Up to generate centers, including matlab files před 2 roky
README.md fde4aa8d47 Up to generate centers, including matlab files před 2 roky
analyze.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion před 1 rokem
analyzeIVF.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion před 1 rokem
analyzePixel.m 338139ad91 Finishing matlab scripts with quit statement to prevent hangs on matlab completion před 1 rokem
analyzePixelIVF.m 85cf688137 Adding matlab scripts to handle nrrd segmentations před 1 rokem
evaluateCenterDiff.m fde4aa8d47 Up to generate centers, including matlab files před 2 roky
evaluateCenters.m fde4aa8d47 Up to generate centers, including matlab files před 2 roky
evaluateSingleDiff.m fde4aa8d47 Up to generate centers, including matlab files před 2 roky
evaluateSingleDiffZero.m fde4aa8d47 Up to generate centers, including matlab files před 2 roky
extractCenters.m 74028781c2 Changing extractCenters to layout with first column for region index; multiple entries can be made for a single region před 1 rokem
extractPixelsFromNrrd.m 85cf688137 Adding matlab scripts to handle nrrd segmentations před 1 rokem
fitCenters.m e098801656 Cosmetic changes to fitCenters před 1 rokem
fitCentersIVF.m 285e42984e Adding ploting of IVF fits in fitCentersIVF před 1 rokem
fitCentersPixel.asv fde4aa8d47 Up to generate centers, including matlab files před 2 roky
fitCentersPixel.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write před 1 rokem
fitCentersPixelIVF.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write před 1 rokem
fitFromClusters.asv fde4aa8d47 Up to generate centers, including matlab files před 2 roky
fitFromClusters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write před 1 rokem
fitSingle.m 032bbc54b8 Correcting fit functions to use delays, in some rare conditions non-offseted time values were still used před 1 rokem
fitSingleRamp.m fde4aa8d47 Up to generate centers, including matlab files před 2 roky
fitSingleZero.m 032bbc54b8 Correcting fit functions to use delays, in some rare conditions non-offseted time values were still used před 1 rokem
generateCenters.m 18e26aadd9 Adding quit to generateCenters před 1 rokem
generateInitialValues.m fde4aa8d47 Up to generate centers, including matlab files před 2 roky
getData.m fde4aa8d47 Up to generate centers, including matlab files před 2 roky
globalValueGenerator.m bf13fea75b Compact way to generate values for the fits in matlab před 1 rokem
loadCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write před 1 rokem
loadData.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write před 1 rokem
loadPixels.m fde4aa8d47 Up to generate centers, including matlab files před 2 roky
loadResults.m fde4aa8d47 Up to generate centers, including matlab files před 2 roky
loadSPECTdata.m c317e06d8d Version that produced results sent in email to Luka, Oct 28th 2022. před 2 roky
loadSegmentation.m fde4aa8d47 Up to generate centers, including matlab files před 2 roky
loadTime.asv fde4aa8d47 Up to generate centers, including matlab files před 2 roky
loadTime.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write před 1 rokem
nrrdWriter.m fde4aa8d47 Up to generate centers, including matlab files před 2 roky
nrrdread.m fde4aa8d47 Up to generate centers, including matlab files před 2 roky
plotFunctions.m fde4aa8d47 Up to generate centers, including matlab files před 2 roky
readFitParameters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write před 1 rokem
rfp.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write před 1 rokem
saveCenters.m 05aa81223b Updating matlab scripts to rely on path supplied as argument and be robust to 2017a version where read/write matrix is replaced with dlmread/write před 1 rokem
writeData.m fde4aa8d47 Up to generate centers, including matlab files před 2 roky

README.md

Usage

Master routines are written in analyze.m. Full usage:

patientId='XXX'
analyze